Please go through the Troubleshooting Checklist – especially #2 safe mode and #7 reset window sizes.
[I don’t understand what you mean by “in a separate macOS Space” – but if that’s normal macOS-specific terminology, I’m sure it will make sense to someone else.] Thanks for explaining, @BenJamesBen!
(In the macOS graphical UI, “Spaces” are desktops where windows appear. By default there is only one desktop, but it is possible to have multiple desktops to better organize and arrange windows.)
@Louska, you said that this problem started since you updated to Anki 26.09.2 and macOS Golden Gate 27. Was the behavior different on previous versions? If so, what was the different behavior, and what Anki versions and what macOS versions was the different behavior present on?
However, I suspect that you might be seeing the current expected behavior. It seems that when the Anki Decks window is full-screen and the Browse or Add windows are opened, they also are created as full-screen windows. And, macOS seems to create every full-screen window as it’s own separate Space.
In the above screenshot, I started the Anki app in the “Desktop 1” Space, made it full-screen, and then pressed the Browse and Add buttons to create those windows. You can see that there are 5 separate Spaces:
“Desktop 1”,
the full-screen Decks window for my “Testing4” profile,
the full-screen Add window,
the full-screen Browse window, and
“Desktop 2” (another Space that I had previously set up).