Lost Decks after Downloading with Ankiweb

Is there any way to retrieve lost decks after syncing from Ankiweb and having an outdated version of my decks overriding my latest and more updated versions? I tried syncing my desktop with my iPad but my most recent additions were lost on my desktop as my iPad version overrode them. Is there anything that can be done?

https://docs.ankiweb.net/backups.html